CRISPR-U™ Gene Knockout Cell Line Strategy

MAPK6 Gene Knockout Strategy

CRISPR-U™ technology (CRISPR based), developed by Ubigene, is more efficient than general CRISPR/Cas9 technology in double-strand breaking and homologous recombination. With CRISPR-U™, Ubigene has successfully edited over 3000 genes on more than 100 types of cell lines.
Objective
To create a Human MAPK6 Knockout model in cell line by CRISPR-U™-mediated genome engineering.
Target gene info
Official symbol MAPK6
Gene id 5597
Organism Homo sapiens
Official full symbol mitogen-activated protein kinase 6
Gene type protein-coding
Also known as ERK3, HsT17250, PRKM6, p97MAPK
Summary The protein encoded by this gene is a member of the Ser/Thr protein kinase family, and is most closely related to mitogen-activated protein kinases (MAP kinases). MAP kinases also known as extracellular signal-regulated kinases (ERKs), are activated through protein phosphorylation cascades and act as integration points for multiple biochemical signals. This kinase is localized in the nucleus, and has been reported to be activated in fibroblasts upon treatment with serum or phorbol esters.
Genomic regions Chromosome 15
Strategy Summary
This gene has 5 protein coding transcripts:
Name Transcript ID bp Protein Biotype CCDS UniProt Match RefSeq Match Flags
MAPK6-212 ENST00000681888.1 5338 721aa Protein coding CCDS10147 - - GENCODE basic, APPRIS P1,
MAPK6-201 ENST00000261845.7 5330 721aa Protein coding CCDS10147 Q16659 NM_002748.4 TSL:1, GENCODE basic, APPRIS P1, MANE Select v0.92,
MAPK6-209 ENST00000680066.1 5299 721aa Protein coding CCDS10147 - - GENCODE basic, APPRIS P1,
MAPK6-210 ENST00000680652.1 5288 721aa Protein coding CCDS10147 - - GENCODE basic, APPRIS P1,
MAPK6-211 ENST00000680777.1 5287 721aa Protein coding CCDS10147 - - GENCODE basic, APPRIS P1,
MAPK6-204 ENST00000558841.1 656 No protein Processed transcript - - - TSL:2,
MAPK6-202 ENST00000558063.5 583 No protein Processed transcript - - - TSL:4,
MAPK6-205 ENST00000558891.1 583 No protein Processed transcript - - - TSL:3,
MAPK6-206 ENST00000560254.1 574 No protein Processed transcript - - - TSL:4,
MAPK6-207 ENST00000560774.1 574 No protein Processed transcript - - - TSL:4,
MAPK6-208 ENST00000560802.1 552 No protein Processed transcript - - - TSL:4,
MAPK6-203 ENST00000558100.1 514 No protein Processed transcript - - - TSL:2,
Ubigene Red Cotton Transcript
Strategy
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Red Cotton™ Assessment    
Project Difficulty Level unknown
Target Gene MAPK6
This KO Strategy loading
Red Cotton™ Notes Gene MAPK6 had been KO in hela cell line.
Aforementioned information comes from Ubigene database. Different origin of cell lines may have different condition. Ubigene reserved all the right for final explanation.
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Work flow
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