CRISPR-U™ Gene Knockout Cell Line Strategy

MCAM Gene Knockout Strategy

CRISPR-U™ technology (CRISPR based), developed by Ubigene, is more efficient than general CRISPR/Cas9 technology in double-strand breaking and homologous recombination. With CRISPR-U™, Ubigene has successfully edited over 3000 genes on more than 100 types of cell lines.
Objective
To create a Human MCAM Knockout model in cell line by CRISPR-U™-mediated genome engineering.
Target gene info
Official symbol MCAM
Gene id 4162
Organism Homo sapiens
Official full symbol melanoma cell adhesion molecule
Gene type protein-coding
Also known as CD146, HEMCAM, METCAM, MUC18, MelCAM
Genomic regions Chromosome 11
Strategy Summary
This gene has 1 protein coding transcripts:
Name Transcript ID bp Protein Biotype CCDS UniProt Match RefSeq Match Flags
MCAM-201 ENST00000264036.6 3327 646aa Protein coding CCDS31690 P43121-1 NM_006500.3 TSL:1, GENCODE basic, APPRIS P1, MANE Select v0.92,
MCAM-214 ENST00000530144.6 909 No protein Processed transcript - - - TSL:3,
MCAM-211 ENST00000529295.5 757 No protein Processed transcript - - - TSL:4,
MCAM-209 ENST00000528976.1 722 No protein Processed transcript - - - TSL:3,
MCAM-206 ENST00000526992.1 574 No protein Processed transcript - - - TSL:4,
MCAM-217 ENST00000534522.5 569 No protein Processed transcript - - - TSL:4,
MCAM-203 ENST00000525555.5 567 No protein Processed transcript - - - TSL:4,
MCAM-210 ENST00000529257.5 563 No protein Processed transcript - - - TSL:5,
MCAM-212 ENST00000529686.5 563 No protein Processed transcript - - - TSL:4,
MCAM-215 ENST00000530706.5 541 No protein Processed transcript - - - TSL:4,
MCAM-207 ENST00000528502.5 478 No protein Processed transcript - - - TSL:4,
MCAM-202 ENST00000524940.5 206 No protein Processed transcript - - - TSL:3,
MCAM-204 ENST00000525586.5 4865 No protein Retained intron - - - TSL:5,
MCAM-208 ENST00000528533.5 3164 No protein Retained intron - - - TSL:5,
MCAM-216 ENST00000530937.5 588 No protein Retained intron - - - TSL:4,
MCAM-213 ENST00000530006.5 562 No protein Retained intron - - - TSL:2,
MCAM-205 ENST00000526190.5 555 No protein Retained intron - - - TSL:4,
Ubigene Red Cotton Transcript
Strategy
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Red Cotton™ Assessment    
Project Difficulty Level unknown
Target Gene MCAM
This KO Strategy loading
Red Cotton™ Notes Gene MCAM had been KO in hela cell line.
Aforementioned information comes from Ubigene database. Different origin of cell lines may have different condition. Ubigene reserved all the right for final explanation.
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Work flow
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