CRISPR-U™ Gene Knockout Cell Line Strategy

GSS Gene Knockout Strategy

CRISPR-U™ technology (CRISPR based), developed by Ubigene, is more efficient than general CRISPR/Cas9 technology in double-strand breaking and homologous recombination. With CRISPR-U™, Ubigene has successfully edited over 3000 genes on more than 100 types of cell lines.
Objective
To create a Human GSS Knockout model in cell line by CRISPR-U™-mediated genome engineering.
Target gene info
Official symbol GSS
Gene id 2937
Organism Homo sapiens
Official full symbol glutathione synthetase
Gene type protein-coding
Also known as GSHS, HEL-S-64p, HEL-S-88n
Summary Glutathione is important for a variety of biological functions, including protection of cells from oxidative damage by free radicals, detoxification of xenobiotics, and membrane transport. The protein encoded by this gene functions as a homodimer to catalyze the second step of glutathione biosynthesis, which is the ATP-dependent conversion of gamma-L-glutamyl-L-cysteine to glutathione. Defects in this gene are a cause of glutathione synthetase deficiency.
Genomic regions Chromosome 20
Strategy Summary
This gene has 11 protein coding transcripts:
Name Transcript ID bp Protein Biotype CCDS UniProt Match RefSeq Match Flags
GSS-217 ENST00000644793.1 2702 474aa Protein coding CCDS13245 P48637-1 - GENCODE basic, APPRIS P1,
GSS-205 ENST00000643188.1 1940 474aa Protein coding CCDS13245 P48637-1 - GENCODE basic, APPRIS P1,
GSS-228 ENST00000651619.1 1909 474aa Protein coding CCDS13245 P48637-1 NM_000178.4 GENCODE basic, APPRIS P1, MANE Select v0.92,
GSS-203 ENST00000642498.1 2131 450aa Protein coding - A0A2R8Y430 - GENCODE basic,
GSS-226 ENST00000646735.1 1554 363aa Protein coding - P48637-2 - GENCODE basic,
GSS-209 ENST00000643502.1 1310 360aa Protein coding - A0A2R8Y5T7 - CDS 5' incomplete,
GSS-201 ENST00000451957.2 1092 363aa Protein coding - P48637-2 - TSL:1, GENCODE basic,
GSS-219 ENST00000645328.1 870 169aa Protein coding - A0A2R8Y6Q7 - CDS 5' incomplete,
GSS-207 ENST00000643271.1 587 134aa Protein coding - A0A2R8YF34 - CDS 3' incomplete,
GSS-218 ENST00000645102.1 512 112aa Protein coding - A0A2R8Y790 - CDS 3' incomplete,
GSS-215 ENST00000644608.1 450 30aa Protein coding - A0A2R8Y2F2 - CDS 3' incomplete,
GSS-222 ENST00000646405.1 1667 124aa Nonsense mediated decay - A0A2R8Y446 - -
GSS-204 ENST00000642538.1 1540 132aa Nonsense mediated decay - A0A0S2Z4J7 - -
GSS-208 ENST00000643443.1 1437 81aa Nonsense mediated decay - A0A2R8Y6Y6 - -
GSS-220 ENST00000645408.1 830 155aa Nonsense mediated decay - A0A2R8Y7I7 - CDS 5' incomplete,
GSS-202 ENST00000642493.1 767 48aa Nonsense mediated decay - A0A2R8Y2X9 - -
GSS-227 ENST00000646766.1 732 97aa Nonsense mediated decay - A0A2R8Y4V9 - -
GSS-224 ENST00000646502.1 1870 No protein Processed transcript - - - -
GSS-210 ENST00000643628.1 920 No protein Processed transcript - - - -
GSS-223 ENST00000646497.1 900 No protein Processed transcript - - - -
GSS-221 ENST00000645723.1 3019 No protein Retained intron - - - -
GSS-212 ENST00000643908.1 1998 No protein Retained intron - - - -
GSS-225 ENST00000646512.1 1907 No protein Retained intron - - - -
GSS-214 ENST00000644538.1 1780 No protein Retained intron - - - -
GSS-216 ENST00000644694.1 747 No protein Retained intron - - - -
GSS-213 ENST00000644197.1 728 No protein Retained intron - - - -
GSS-211 ENST00000643690.1 573 No protein Retained intron - - - -
GSS-206 ENST00000643203.1 461 No protein Retained intron - - - -
Ubigene Red Cotton Transcript
Strategy
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Red Cotton™ Assessment    
Project Difficulty Level unknown
Target Gene GSS
This KO Strategy loading
Red Cotton™ Notes Gene GSS had been KO in hek293t cell line.
Aforementioned information comes from Ubigene database. Different origin of cell lines may have different condition. Ubigene reserved all the right for final explanation.
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Work flow
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