CRISPR-U™ Gene Knockout Cell Line Strategy

EML4 Gene Knockout Strategy

CRISPR-U™ technology (CRISPR based), developed by Ubigene, is more efficient than general CRISPR/Cas9 technology in double-strand breaking and homologous recombination. With CRISPR-U™, Ubigene has successfully edited over 3000 genes on more than 100 types of cell lines.
Objective
To create a Human EML4 Knockout model in cell line by CRISPR-U™-mediated genome engineering.
Target gene info
Official symbol EML4
Gene id 27436
Organism Homo sapiens
Official full symbol EMAP like 4
Gene type protein-coding
Also known as C2orf2, ELP120, EMAP-4, EMAPL4, ROPP120
Summary This gene is a member of the echinoderm microtubule associated protein-like family. The encoded WD-repeat protein may be involved in microtubule formation. Abnormal fusion of parts of this gene with portions of the anaplastic lymphoma receptor tyrosine kinase gene, which generates EML4-ALK fusion transcripts, is one of the primary mutations associated with non-small cell lung cancer. Alternative splicing of this gene results in two transcript variants.
Genomic regions Chromosome 2
Strategy Summary
This gene has 3 protein coding transcripts:
Name Transcript ID bp Protein Biotype CCDS UniProt Match RefSeq Match Flags
EML4-201 ENST00000318522.10 5546 981aa Protein coding CCDS1807 Q9HC35-1 NM_019063.5 TSL:1, GENCODE basic, APPRIS P3, MANE Select v0.92,
EML4-203 ENST00000402711.6 3568 923aa Protein coding CCDS46266 Q9HC35-2 - TSL:1, GENCODE basic, APPRIS ALT2,
EML4-202 ENST00000401738.3 3797 992aa Protein coding - B5MBZ0 - TSL:5, GENCODE basic, APPRIS ALT2,
EML4-208 ENST00000482660.1 584 No protein Processed transcript - - - TSL:4,
EML4-206 ENST00000472632.1 515 No protein Processed transcript - - - TSL:3,
EML4-204 ENST00000406175.3 4622 No protein Retained intron - - - TSL:1,
EML4-207 ENST00000480320.1 1932 No protein Retained intron - - - TSL:2,
EML4-205 ENST00000409040.1 962 No protein Retained intron - - - TSL:1,
Ubigene Red Cotton Transcript
Strategy Click to get
Red Cotton™ Assessment    
Project Difficulty Level unknown
Target Gene EML4
This KO Strategy loading
Red Cotton™ Notes Gene EML4 had been KO in hela cell line.
Aforementioned information comes from Ubigene database. Different origin of cell lines may have different condition. Ubigene reserved all the right for final explanation.
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Work flow
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