CRISPR-U™ Gene Knockout Cell Line Strategy

ULK3 Gene Knockout Strategy

CRISPR-U™ technology (CRISPR based), developed by Ubigene, is more efficient than general CRISPR/Cas9 technology in double-strand breaking and homologous recombination. With CRISPR-U™, Ubigene has successfully edited over 3000 genes on more than 100 types of cell lines.
Objective
To create a Human ULK3 Knockout model in cell line by CRISPR-U™-mediated genome engineering.
Target gene info
Official symbol ULK3
Gene id 25989
Organism Homo sapiens
Official full symbol unc-51 like kinase 3
Gene type protein-coding
Genomic regions Chromosome 15
Strategy Summary
This gene has 4 protein coding transcripts:
Name Transcript ID bp Protein Biotype CCDS UniProt Match RefSeq Match Flags
ULK3-220 ENST00000569437.5 2611 470aa Protein coding CCDS76779 Q6PHR2-3 - TSL:1, GENCODE basic, APPRIS P4,
ULK3-201 ENST00000440863.7 2580 472aa Protein coding CCDS45305 Q6PHR2-1 NM_001099436.4 TSL:2, GENCODE basic, APPRIS ALT1, MANE Select v0.92,
ULK3-217 ENST00000568667.5 1470 483aa Protein coding - Q6PHR2-4 - TSL:5, GENCODE basic,
ULK3-223 ENST00000631115.1 126 41aa Protein coding - H3BP85 - TSL:5, GENCODE basic,
ULK3-224 ENST00000647587.1 2674 41aa Nonsense mediated decay - H3BP85 - -
ULK3-215 ENST00000568210.5 1717 50aa Nonsense mediated decay - H3BMW8 - TSL:2,
ULK3-216 ENST00000568273.5 1711 50aa Nonsense mediated decay - H3BMW8 - TSL:2,
ULK3-213 ENST00000566631.5 1633 84aa Nonsense mediated decay - H3BPN6 - TSL:2,
ULK3-205 ENST00000563301.5 884 136aa Nonsense mediated decay - H3BT78 - TSL:4,
ULK3-210 ENST00000565790.5 567 42aa Nonsense mediated decay - H3BTS3 - TSL:4,
ULK3-203 ENST00000562161.5 561 61aa Nonsense mediated decay - H3BS27 - TSL:4,
ULK3-209 ENST00000565373.5 561 49aa Nonsense mediated decay - H3BV76 - TSL:4,
ULK3-218 ENST00000568679.1 539 41aa Nonsense mediated decay - H3BP85 - TSL:5,
ULK3-222 ENST00000570276.5 2951 No protein Retained intron - - - TSL:1,
ULK3-202 ENST00000561725.5 2738 No protein Retained intron - - - TSL:5,
ULK3-212 ENST00000566479.5 2715 No protein Retained intron - - - TSL:1,
ULK3-211 ENST00000565881.5 1565 No protein Retained intron - - - TSL:5,
ULK3-204 ENST00000562395.5 1004 No protein Retained intron - - - TSL:2,
ULK3-206 ENST00000564029.5 942 No protein Retained intron - - - TSL:5,
ULK3-207 ENST00000564767.5 916 No protein Retained intron - - - TSL:2,
ULK3-208 ENST00000565011.5 886 No protein Retained intron - - - TSL:2,
ULK3-214 ENST00000567472.5 841 No protein Retained intron - - - TSL:3,
ULK3-219 ENST00000568718.5 707 No protein Retained intron - - - TSL:2,
ULK3-221 ENST00000569813.5 579 No protein Retained intron - - - TSL:2,
Ubigene Red Cotton Transcript
Strategy
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Red Cotton™ Assessment    
Project Difficulty Level unknown
Target Gene ULK3
This KO Strategy loading
Red Cotton™ Notes Gene ULK3 had been KO in hek293t cell line.
Aforementioned information comes from Ubigene database. Different origin of cell lines may have different condition. Ubigene reserved all the right for final explanation.
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Work flow
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