Official symbol | JMJD6 |
Gene id | 23210 |
Organism | Homo sapiens |
Official full symbol | jumonji domain containing 6, arginine demethylase and lysine hydroxylase |
Gene type | protein-coding |
Also known as | PSR, PTDSR, PTDSR1 |
Summary | This gene encodes a nuclear protein with a JmjC domain. JmjC domain-containing proteins are predicted to function as protein hydroxylases or histone demethylases. This protein was first identified as a putative phosphatidylserine receptor involved in phagocytosis of apoptotic cells; however, subsequent studies have indicated that it does not directly function in the clearance of apoptotic cells, and questioned whether it is a true phosphatidylserine receptor. Multiple transcript variants encoding different isoforms have been found for this gene. |
Genomic regions | Chromosome 17 |
Name | Transcript ID | bp | Protein | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
JMJD6-203 | ENST00000445478.6 | 5303 | 414aa | Protein coding | CCDS42383 | Q6NYC1-3 | - | TSL:1, GENCODE basic, APPRIS ALT1, |
JMJD6-202 | ENST00000397625.9 | 1621 | 403aa | Protein coding | CCDS42384 | Q6NYC1-1 | NM_015167.3 | TSL:1, GENCODE basic, APPRIS P4, MANE Select v0.92, |
JMJD6-208 | ENST00000617192.4 | 5517 | 361aa | Protein coding | - | B2WTI4 | - | TSL:5, GENCODE basic, |
JMJD6-205 | ENST00000585429.1 | 1330 | 395aa | Protein coding | - | K7EJU9 | - | TSL:5, GENCODE basic, |
JMJD6-204 | ENST00000542934.5 | 1898 | 361aa | Nonsense mediated decay | - | B2WTI4 | - | TSL:2, |
JMJD6-201 | ENST00000303996.10 | 1893 | 335aa | Nonsense mediated decay | - | B2WTI3 | - | TSL:2, |
JMJD6-207 | ENST00000591460.1 | 667 | No protein | Retained intron | - | - | - | TSL:2, |
JMJD6-206 | ENST00000589982.1 | 467 | No protein | Retained intron | - | - | - | TSL:2, |
Target Gene | JMJD6 |
This KO Strategy | loading |
Red Cotton™ Notes | Gene JMJD6 had been KO in hek293t cell line. |
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