Official symbol | CHD1 |
Gene id | 1105 |
Organism | Homo sapiens |
Official full symbol | chromodomain helicase DNA binding protein 1 |
Gene type | protein-coding |
Also known as | CHD-1, PILBOS |
Summary | The CHD family of proteins is characterized by the presence of chromo (chromatin organization modifier) domains and SNF2-related helicase/ATPase domains. CHD genes alter gene expression possibly by modification of chromatin structure thus altering access of the transcriptional apparatus to its chromosomal DNA template. |
Genomic regions | Chromosome 5 |
Name | Transcript ID | bp | Protein | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
CHD1-212 | ENST00000614616.5 | 8145 | 1710aa | Protein coding | CCDS34204 | O14646-1 | NM_001270.4 | TSL:5, GENCODE basic, APPRIS P1, MANE Select v0.92, |
CHD1-201 | ENST00000284049.7 | 6457 | 1710aa | Protein coding | CCDS34204 | O14646-1 | - | TSL:1, GENCODE basic, APPRIS P1, |
CHD1-206 | ENST00000511067.2 | 817 | 272aa | Protein coding | - | A0A087WVF4 | - | CDS 5' and 3' incomplete, TSL:5, |
CHD1-209 | ENST00000512844.5 | 848 | 22aa | Nonsense mediated decay | - | H0Y8Z0 | - | CDS 5' incomplete, TSL:5, |
CHD1-203 | ENST00000505657.1 | 736 | 113aa | Nonsense mediated decay | - | H0Y8V4 | - | CDS 5' incomplete, TSL:3, |
CHD1-211 | ENST00000514344.5 | 2955 | No protein | Retained intron | - | - | - | TSL:5, |
CHD1-208 | ENST00000512392.5 | 1968 | No protein | Retained intron | - | - | - | TSL:2, |
CHD1-210 | ENST00000513064.1 | 786 | No protein | Retained intron | - | - | - | TSL:2, |
CHD1-204 | ENST00000505982.1 | 758 | No protein | Retained intron | - | - | - | TSL:3, |
CHD1-205 | ENST00000508756.2 | 724 | No protein | Retained intron | - | - | - | TSL:5, |
CHD1-207 | ENST00000511628.1 | 599 | No protein | Retained intron | - | - | - | TSL:3, |
CHD1-202 | ENST00000414220.2 | 434 | No protein | Retained intron | - | - | - | TSL:5, |
Target Gene | CHD1 |
This KO Strategy | loading |
Red Cotton™ Notes | Gene CHD1 had been KO in hek293t cell line. |
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