CRISPR-U™ Gene Knockout Cell Line Strategy

NME6 Gene Knockout Strategy

CRISPR-U™ technology (CRISPR based), developed by Ubigene, is more efficient than general CRISPR/Cas9 technology in double-strand breaking and homologous recombination. With CRISPR-U™, Ubigene has successfully edited over 3000 genes on more than 100 types of cell lines.
Objective
To create a Human NME6 Knockout model in cell line by CRISPR-U™-mediated genome engineering.
Target gene info
Official symbol NME6
Gene id 10201
Organism Homo sapiens
Official full symbol NME/NM23 nucleoside diphosphate kinase 6
Gene type protein-coding
Also known as IPIA-ALPHA, NDK 6, NM23-H6
Summary Nucleoside diphosphate (NDP) kinases (EC 2.7.4.6), such as NME6, are ubiquitous enzymes that catalyze transfer of gamma-phosphates, via a phosphohistidine intermediate, between nucleoside and dioxynucleoside tri- and diphosphates (Mehus et al., 1999 ).
Genomic regions Chromosome 3
Strategy Summary
This gene has 16 protein coding transcripts:
Name Transcript ID bp Protein Biotype CCDS UniProt Match RefSeq Match Flags
NME6-213 ENST00000451657.6 4776 163aa Protein coding CCDS77733 O75414-3 - TSL:2, GENCODE basic,
NME6-209 ENST00000442597.6 2903 186aa Protein coding CCDS77734 O75414-1 NM_001308426.2 TSL:1, GENCODE basic, APPRIS P1, MANE Select v0.92,
NME6-205 ENST00000421967.5 2004 194aa Protein coding CCDS2763 A0A0C4DG91 - TSL:1, GENCODE basic,
NME6-214 ENST00000452211.5 1353 186aa Protein coding CCDS77734 O75414-1 - TSL:5, GENCODE basic, APPRIS P1,
NME6-222 ENST00000643457.1 1320 186aa Protein coding CCDS77734 O75414-1 - GENCODE basic, APPRIS P1,
NME6-207 ENST00000426689.6 1209 186aa Protein coding CCDS77734 O75414-1 - TSL:1, GENCODE basic, APPRIS P1,
NME6-202 ENST00000415053.5 913 186aa Protein coding CCDS77734 O75414-1 - TSL:3, GENCODE basic, APPRIS P1,
NME6-203 ENST00000415644.5 849 119aa Protein coding CCDS82768 O75414-2 - TSL:2, GENCODE basic,
NME6-211 ENST00000447314.5 621 141aa Protein coding CCDS82767 C9JQB1 - TSL:3, GENCODE basic,
NME6-208 ENST00000435684.5 599 163aa Protein coding CCDS77733 O75414-3 - TSL:2, GENCODE basic,
NME6-221 ENST00000643011.1 2254 114aa Protein coding - A0A2R8Y7V2 - GENCODE basic,
NME6-220 ENST00000642710.1 939 88aa Protein coding - A0A2R8Y547 - GENCODE basic,
NME6-210 ENST00000444069.5 866 88aa Protein coding - A0A2R8Y547 - TSL:1, GENCODE basic,
NME6-212 ENST00000447724.1 668 61aa Protein coding - C9J867 - CDS 3' incomplete, TSL:2,
NME6-216 ENST00000456495.5 638 111aa Protein coding - C9J1J2 - CDS 3' incomplete, TSL:5,
NME6-206 ENST00000425930.5 613 174aa Protein coding - C9J9V6 - CDS 3' incomplete, TSL:2,
NME6-204 ENST00000418431.5 794 82aa Nonsense mediated decay - F2Z2J2 - TSL:3,
NME6-215 ENST00000454531.1 552 82aa Nonsense mediated decay - F2Z2J2 - TSL:4,
NME6-218 ENST00000494209.1 1268 No protein Retained intron - - - TSL:3,
NME6-217 ENST00000484959.1 1091 No protein Retained intron - - - TSL:1,
NME6-201 ENST00000302378.2 490 No protein Retained intron - - - TSL:4,
NME6-219 ENST00000495734.1 401 No protein Retained intron - - - TSL:3,
Ubigene Red Cotton Transcript
Strategy Click to get
Red Cotton™ Assessment    
Project Difficulty Level unknown
Target Gene NME6
This KO Strategy loading
Red Cotton™ Notes Gene NME6 had been KO in hek293t cell line.
Aforementioned information comes from Ubigene database. Different origin of cell lines may have different condition. Ubigene reserved all the right for final explanation.
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